Re: Hierarchal vs Non-Hierarchal Interfaces to Biological Taxonomy
Date: 14 Dec 2006 20:41:24 -0800
Message-ID: <1166157684.533360.216840_at_79g2000cws.googlegroups.com>
> jump onto the HOT! HOT! gene wagon.
> Go here: http://www.geneontology.org/
> and download the ontology flat files
> (or better yet the HOT! HOT! XML!).
Holy Jesus! It is the Mother of All Hierarchies!
> Spend a few months playing with all that network
> (as in edges and nodes, ie a graph) data and who knows?
> You might be able to contribute neo DB software to the project.
I am already thinking of renaming it to GO Dummy GO :)
> And they already have a mySQL file so when it comes time to
> compare your queries to SQL or similar, the data is already
> formatted for you. Have fun!
Thanks. Just for fun, I download the 10 MB text file that can viewed with NotePad. I would have thought it would be much larger. Looks as though I would have to write a custom parser to import the data into dbd from this or any of the other downloadable formats.
> Keith -- Fraud 6
You're still carrying the Badge that Cimode bestowed upon you? Received on Fri Dec 15 2006 - 05:41:24 CET